STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ07164.1TolB protein. (304 aa)    
Predicted Functional Partners:
SHJ07130.1
KOW motif-containing protein.
       0.773
SHJ16518.1
Tetratricopeptide repeat-containing protein.
  
  
 0.509
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.506
SHI28936.1
Haem-binding domain-containing protein.
  
   0.499
SHI41739.1
Cytochrome c peroxidase.
  
   0.499
SHI60072.1
Por secretion system C-terminal sorting domain-containing protein.
   
   0.497
SHJ17785.1
Por secretion system C-terminal sorting domain-containing protein.
   
   0.497
SHI38278.1
Outer membrane protein beta-barrel domain-containing protein.
   
  0.489
SHI59853.1
Thrombospondin type 3 repeat-containing protein.
   
  0.489
SHI61005.1
Outer membrane protein OmpA.
   
  0.489
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.