STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ07262.1Hypothetical protein. (733 aa)    
Predicted Functional Partners:
SHI29530.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.999
SHI32116.1
Two component regulator propeller.
 
0.999
SHI38565.1
PAS domain S-box-containing protein.
 0.999
SHI38674.1
Signal transduction histidine kinase.
 
0.999
SHI68151.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.999
SHI84643.1
PAS domain S-box-containing protein.
 
0.999
SHI97257.1
methylglutaconyl-CoA hydratase.
   
 0.999
SHJ05778.1
PAS domain S-box-containing protein.
0.999
SHI53952.1
PAS/PAC sensor signal transduction histidine kinase.
0.991
SHI49648.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
 0.986
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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