Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI52347.1 | SHI93903.1 | SAMN05216261_0911 | SAMN05216261_2251 | Isochorismate synthase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.942 |
| SHI52347.1 | SHJ09268.1 | SAMN05216261_0911 | SAMN05216261_2763 | Isochorismate synthase. | Shikimate dehydrogenase. | 0.791 |
| SHI52347.1 | SHJ12369.1 | SAMN05216261_0911 | SAMN05216261_2860 | Isochorismate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.422 |
| SHI52347.1 | SHJ18130.1 | SAMN05216261_0911 | SAMN05216261_3059 | Isochorismate synthase. | Anthranilate synthase component 2. | 0.935 |
| SHI52347.1 | aroA | SAMN05216261_0911 | SAMN05216261_2259 | Isochorismate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.562 |
| SHI52347.1 | aroC | SAMN05216261_0911 | SAMN05216261_2081 | Isochorismate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.907 |
| SHI52347.1 | aroK | SAMN05216261_0911 | SAMN05216261_2445 | Isochorismate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.418 |
| SHI52347.1 | aroQ | SAMN05216261_0911 | SAMN05216261_1027 | Isochorismate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.713 |
| SHI93903.1 | SHI52347.1 | SAMN05216261_2251 | SAMN05216261_0911 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Isochorismate synthase. | 0.942 |
| SHI93903.1 | SHJ09268.1 | SAMN05216261_2251 | SAMN05216261_2763 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate dehydrogenase. | 0.961 |
| SHI93903.1 | SHJ12369.1 | SAMN05216261_2251 | SAMN05216261_2860 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.993 |
| SHI93903.1 | SHJ18130.1 | SAMN05216261_2251 | SAMN05216261_3059 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Anthranilate synthase component 2. | 0.942 |
| SHI93903.1 | aroA | SAMN05216261_2251 | SAMN05216261_2259 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.993 |
| SHI93903.1 | aroC | SAMN05216261_2251 | SAMN05216261_2081 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.995 |
| SHI93903.1 | aroK | SAMN05216261_2251 | SAMN05216261_2445 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.977 |
| SHI93903.1 | aroQ | SAMN05216261_2251 | SAMN05216261_1027 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.797 |
| SHJ09225.1 | SHJ09248.1 | SAMN05216261_2761 | SAMN05216261_2762 | Putative membrane protein. | Uncharacterized membrane protein. | 0.795 |
| SHJ09225.1 | SHJ09268.1 | SAMN05216261_2761 | SAMN05216261_2763 | Putative membrane protein. | Shikimate dehydrogenase. | 0.783 |
| SHJ09248.1 | SHJ09225.1 | SAMN05216261_2762 | SAMN05216261_2761 | Uncharacterized membrane protein. | Putative membrane protein. | 0.795 |
| SHJ09248.1 | SHJ09268.1 | SAMN05216261_2762 | SAMN05216261_2763 | Uncharacterized membrane protein. | Shikimate dehydrogenase. | 0.783 |
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