STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ09404.1DNA mismatch repair enzyme MutH. (466 aa)    
Predicted Functional Partners:
SHJ09359.1
DNA (cytosine-5)-methyltransferase 1.
     0.992
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
    
 
 0.983
SHJ09337.1
Helix-turn-helix domain-containing protein.
 
     0.931
SHJ09377.1
Hypothetical protein.
       0.784
SHI68854.1
4Fe-4S single cluster domain-containing protein.
  
     0.655
SHI35255.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.615
SHI94822.1
Hypothetical protein.
  
     0.464
SHI55483.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.