STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000286355_00772Unannotated protein. (227 aa)    
Predicted Functional Partners:
GCA_000286355_03712
Unannotated protein.
  
     0.463
GCA_000286355_01493
Unannotated protein.
  
 
 0.457
GCA_000286355_02710
Unannotated protein.
  
     0.454
GCA_000286355_00332
Unannotated protein.
     
 0.452
GCA_000286355_00771
Unannotated protein.
       0.452
GCA_000286355_02604
Unannotated protein.
  
     0.440
GCA_000286355_01156
Unannotated protein.
  
  
 0.431
GCA_000286355_03660
Unannotated protein.
  
     0.431
GCA_000286355_02004
Unannotated protein.
  
     0.428
GCA_000286355_01030
Unannotated protein.
 
     0.423
Your Current Organism:
Kocuria atrinae
NCBI taxonomy Id: 1179225
Other names: K. atrinae C3-8, Kocuria atrinae C3-8, Kocuria atrinae str. C3-8, Kocuria atrinae strain C3-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.