STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN6_32340ABC transporter-like protein. (263 aa)    
Predicted Functional Partners:
BN6_40790
Hypothetical protein.
  
 
 0.921
BN6_32330
ABC-type transport system.
 
 
 0.912
BN6_38890
ABC-type transporter, permease subunit.
 
 
 0.796
BN6_68040
Hypothetical protein.
 
 
 0.771
BN6_67500
Hypothetical protein.
 
 
 0.768
BN6_60830
Hypothetical protein.
 
 
 0.751
BN6_54560
Hypothetical protein.
 
 0.735
BN6_17690
ABC-type transporter.
 
 0.666
BN6_38750
Hypothetical protein; Belongs to the AAA ATPase family.
  
     0.606
pheS
Phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
   0.561
Your Current Organism:
Saccharothrix espanaensis
NCBI taxonomy Id: 1179773
Other names: S. espanaensis DSM 44229, Saccharothrix espanaensis ATCC 51144, Saccharothrix espanaensis DSM 44229, Saccharothrix espanaensis NRRL 15764, Saccharothrix espanaensis str. DSM 44229, Saccharothrix espanaensis strain DSM 44229
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.