STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS36259.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)    
Predicted Functional Partners:
ALS36258.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
coaA
Type I pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.574
ALS36257.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
ALS36256.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
       0.434
Your Current Organism:
Enterococcus rotai
NCBI taxonomy Id: 118060
Other names: CCM 4630, CCUG 61593, E. rotai, Enterococcus rotai Sedlacek et al. 2013, Enterococcus sp. CCM 4360, LMG 26678, LMG:26678
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.