STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0159Glycosyl transferase family 39; tr|F6D860|F6D860_METPW;evalue=0.0; PctID=64.36; score=751; {ECO:0000313|EMBL:AEG17205,1}. (565 aa)    
Predicted Functional Partners:
MCBB_0160
Putative protein; tr|F6D861|F6D861_METPW;evalue=0.0; PctID=81.02; score=654; {ECO:0000313|EMBL:AEG17206,1}.
 
     0.524
MCBB_0163
Decaprenyl-phosphate phosphoribosyltransferase; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5-phosphoribose (DPPR). phospho-alpha-D-ribose 1-diphosphate = trans,octacis-decaprenylphospho-beta-D-ribofuranose 5-phosphate + diphosphate. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence=; Name=Ca(2+); [...]
 
  
 0.514
MCBB_1224
Putative protein MJ1222; sp|Q58619|Y1222_METJA;evalue=1e-049; PctID=48.46; score=196.
 
  
 0.474
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
 
   
 0.469
MCBB_0161
UPF0104 membrane protein; sp|O26478|Y378_METTH;evalue=4e-011; PctID=37.93; score=69.3.
 
  
 0.460
MCBB_0185
Putative protein MJ1222; sp|Q58619|Y1222_METJA;evalue=3e-027; PctID=35.37; score=121.
 
  
 0.458
csbB
Putative glycosyltransferase CsbB; sp|Q45539|CSBB_BACSU;evalue=1e-020; PctID=26.58; score=100.
 
  
 0.458
MCBB_1298
Putative protein MJ1222; sp|Q58619|Y1222_METJA;evalue=2e-026; PctID=37.44; score=119.
 
  
 0.457
agl6
Hexosyltransferase involved in N-glycan biosynthetic pathway that takes place under low-salt conditions (1.75 M instead of 3.4 M). Participates in the formation of the tetrasaccharide present at 'Asn-532' of S-layer glycoprotein Csg, consisting of a sulfated hexose, 2 hexoses and rhamnose. Together with Agl5, mediates the addition of sugars 1 and 2 to dolichol phosphate in the tetrasaccharide. protein present at 'Asn-532' of S-layer glycoprotein Csg. No effect on 'Asn-47' and 'Asn-117' glycosylation of S-layer glycoprotein Csg; sp|D4GU74|AGL6_HALVD;evalue=4e-052; PctID=48.42; score=204.
 
  
 0.449
agl13
Epimerase involved in N-glycan biosynthetic pathway that takes place under low-salt conditions (1.75 M instead of 3.4 M). Participates in the formation of the tetrasaccharide present at 'Asn-532' of S-layer glycoprotein Csg, consisting of a sulfated hexose, 2 hexoses and rhamnose. Involved in the addition of final rhamnose (sugar 4) of the tetrasaccharide on the dolichol phosphate carrier. present at 'Asn-532' of S-layer glycoprotein Csg. No effect on 'Asn-47' and 'Asn-117' glycosylation of S-layer glycoprotein Csg. family; sp|D4GU69|AGL13_HALVD;evalue=3e-034; PctID=44.67; score=144.
 
   
 0.446
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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