STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0184UPF0104 membrane protein; sp|O26478|Y378_METTH;evalue=6e-105; PctID=57.61; score=380. (333 aa)    
Predicted Functional Partners:
MCBB_0185
Putative protein MJ1222; sp|Q58619|Y1222_METJA;evalue=3e-027; PctID=35.37; score=121.
  
  
 0.801
MCBB_1576
Peptidase C60 sortase A and B; tr|F6D3D2|F6D3D2_METPW;evalue=8e-061; PctID=57.71; score=239; {ECO:0000313|EMBL:AEG18724,1}.
 
     0.575
yifB
Putative protein YifB; sp|P57015|YIFB_SALTY;evalue=1e-007; PctID=41.33; score=58.2.
  
     0.491
MCBB_0226
Peptidase C60 sortase A and B; tr|F6D1X4|F6D1X4_METPW;evalue=3e-086; PctID=66.53; score=324; {ECO:0000313|EMBL:AEG17263,1}.
 
     0.486
MCBB_0484
AAA ATPase; tr|F6D4M7|F6D4M7_METPW;evalue=0.0; PctID=74.71; score=803; {ECO:0000313|EMBL:AEG17512,1}.
  
     0.482
MCBB_2256
ABC-2 type transporter; tr|F6D5W9|F6D5W9_METPW;evalue=1e-130; PctID=64.38; score=473; {ECO:0000313|EMBL:AEG19339,1}.
 
     0.466
MCBB_2261
ABC transporter, permease component; tr|F6D5X4|F6D5X4_METPW;evalue=2e-147; PctID=66.07; score=529; {ECO:0000313|EMBL:AEG19344,1}.
 
     0.444
MCBB_1443
Putative protein; tr|F0TAW0|F0TAW0_METLA;evalue=2e-101; PctID=48.30; score=376; {ECO:0000313|EMBL:ADZ08986,1}.
  
     0.426
MCBB_0186
Phosphoglucomutase/phosphomannomutase{03|}; Catalyzes the interconversion of glucose 1-phosphate and glucose 6-phosphate, and the interconversion of mannose 1-phosphate and mannose 6-phosphate. Also displays low activity with deoxyribose 1-phosphate and glucosamine 1-phosphate. 6-phosphate. phosphate. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; Note=Can also use Ni(2+), Mn(2+) and Zn(2+), to a lesser extent; Kinetic parameters: KM=3.0 mM for glucose 1-phosphate; KM=3.2 mM for mannose 1-phosphate; KM=3.5 mM for 2-deoxyribose 1-phosphate; Vmax=690 umol/min/mg enzyme with glucose 1-ph [...]
     
 0.422
MCBB_2251
UPF0127 protein; sp|O27430|Y1377_METTH;evalue=2e-030; PctID=52.21; score=130.
 
     0.421
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.