STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0289Putative protein MJ0759; sp|Q58169|Y759_METJA;evalue=4e-010; PctID=37.35; score=63.5. (108 aa)    
Predicted Functional Partners:
MCBB_0290
Putative protein MJ0760; sp|Q58170|Y760_METJA;evalue=5e-045; PctID=36.76; score=181.
  
    0.955
MCBB_0291
Putative protein MJ0308; sp|Q57756|Y308_METJA;evalue=9e-063; PctID=55.86; score=239.
       0.773
MCBB_0292
GAF domain protein; tr|F6D219|F6D219_METPW;evalue=5e-174; PctID=60.33; score=617; {ECO:0000313|EMBL:AEG17308,1}.
       0.471
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.