STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0415Putative protein MJ0119; sp|Q57583|Y119_METJA;evalue=5e-064; PctID=54.98; score=244. (228 aa)    
Predicted Functional Partners:
MCBB_0414
Putative protein MJ0120; sp|Q57584|Y120_METJA;evalue=1e-095; PctID=68.38; score=348.
  
    0.944
comA
Phosphosulfolactate synthase; Catalyzes the addition of sulfite to phosphoenolpyruvate (PEP) to yield (2R)-phospho-3-sulfolactate (PSL). phosphoenolpyruvate + hydrogen sulfite. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; pH dependence: Optimum pH is 8.5; sulfoacetaldehyde from phosphoenolpyruvate and sulfite: step 1/4; sp|Q57703|PSLS_METJA;evalue=1e-078; PctID=56.08; score=293.
  
    0.928
MCBB_0412
Putative ABC transporter ATP-binding protein MJ0121; sp|Q57585|Y121_METJA;evalue=6e-093; PctID=67.45; score=340.
  
    0.897
hypB
Putative hydrogenase nickel incorporation protein HypB; Could be involved in nickel binding and accumulation. HypB/HupM subfamily; sp|Q57884|HYPB_METJA;evalue=1e-063; PctID=55.66; score=242.
  
    0.748
MCBB_0416
Putative protein MJ1361; sp|Q58756|Y1361_METJA;evalue=3e-052; PctID=41.05; score=205.
       0.547
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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