STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0421Putative protein; tr|F6D3N3|F6D3N3_METPW;evalue=2e-045; PctID=66.43; score=187; {ECO:0000313|EMBL:AEG17450,1}. (140 aa)    
Predicted Functional Partners:
MCBB_0422
Putative protein MJ0653; sp|Q58069|Y653_METJA;evalue=3e-007; PctID=30.88; score=55.8.
       0.786
MCBB_0424
Putative protein MTH_994; sp|O27075|Y994_METTH;evalue=3e-102; PctID=50.00; score=372.
       0.590
yxiE
Universal stress protein YxiE; sp|P42297|YXIE_BACSU;evalue=3e-014; PctID=33.99; score=77.4.
       0.579
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.