STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0428UPF0146 protein; sp|O27081|YA00_METTH;evalue=3e-032; PctID=49.60; score=136; Belongs to the UPF0146 family. (129 aa)    
Predicted Functional Partners:
cbiJ
Cobalt-precorrin-6A reductase; Catalyzes the reduction of the macrocycle of cobalt-precorrin-6A to cobalt-precorrin-6B. precorrin-6A + NADH. cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route): step 7/10; sp|O27083|CBIJ_METTH;evalue=9e-023; PctID=44.00; score=107.
       0.820
yoaB
Calcium-transporting ATPase 1; Catalyzes the hydrolysis of ATP coupled with the transport of calcium. + Ca(2+)(Side 2). cyclopiazonic acid (CPA). membrane protein (TC 3.A.3) family. Type IIA subfamily; sp|Q9CFU9|LLCA1_LACLA;evalue=1e-120; PctID=41.65; score=434.
  
    0.804
MCBB_0427
Putative N-acetyltransferase MJ1530; sp|Q58925|Y1530_METJA;evalue=3e-023; PctID=41.18; score=107.
       0.644
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.