STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0553Pseudomurein-binding repeat-containing protein; tr|F0TAI6|F0TAI6_METLA;evalue=4e-023; PctID=60.00; score=114; {ECO:0000313|EMBL:ADZ10058,1}. (224 aa)    
Predicted Functional Partners:
nucI
Thermonuclease; Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5'-position of the phosphodiester bond. phosphates and 3'-phosphooligonucleotide end-products. Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence=; sp|P43269|NUC_STAIN;evalue=7e-007; PctID=33.67; score=53.5.
       0.445
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.