STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0823Putative protein; tr|F0T9D4|F0T9D4_METLA;evalue=5e-052; PctID=55.08; score=209; {ECO:0000313|EMBL:ADZ09885,1}. (196 aa)    
Predicted Functional Partners:
MCBB_0822
Tetratricopeptide TPR_1 repeat-containing protein; tr|F6D892|F6D892_METPW;evalue=1e-054; PctID=60.49; score=218; {ECO:0000313|EMBL:AEG17831,1}.
       0.519
MCBB_0821
Peptidase S24/S26A/S26B, conserved region; tr|F6D3E6|F6D3E6_METPW;evalue=3e-050; PctID=54.50; score=204; {ECO:0000313|EMBL:AEG18738,1}.
       0.460
MCBB_0824
Putative protein; tr|F6D896|F6D896_METPW;evalue=2e-024; PctID=40.61; score=117; {ECO:0000313|EMBL:AEG17835,1}.
       0.422
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.