STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0877Putative protein; tr|F0T7P3|F0T7P3_METLA;evalue=3e-027; PctID=57.01; score=126; {ECO:0000313|EMBL:ADZ09611,1}. (118 aa)    
Predicted Functional Partners:
MCBB_0876
Putative protein; tr|F0T7P4|F0T7P4_METLA;evalue=2e-045; PctID=42.93; score=188; {ECO:0000313|EMBL:ADZ09612,1}.
       0.786
recQ3
Putative ATP-dependent DNA helicase RecQ; Probable DNA helicase. Required for DNA repair and intramolecular recombination; probably has overlapping function with RecS (AC P50729). It probably acts to help generate ss-DNA from ds-DNA breaks. Note=Localized throughout the nucleoid in the presence or absence of DNA double-strand breaks. sensitive to DNA-damaging agents. Sensitivity increases in the presence of mutated AddAB nuclease. ProRule:PRU00328}; sp|O34748|RECQ_BACSU;evalue=1e-017; PctID=31.15; score=91.3.
       0.601
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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