STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_1063Putative protein; tr|F6D393|F6D393_METPW;evalue=2e-095; PctID=70.31; score=355; {ECO:0000313|EMBL:AEG18033,1}. (263 aa)    
Predicted Functional Partners:
MCBB_1134
Putative protein; tr|F6D534|F6D534_METPW;evalue=3e-086; PctID=51.91; score=325; {ECO:0000313|EMBL:AEG17569,1}.
  
     0.566
MCBB_1062
Putative protein; tr|F6D526|F6D526_METPW;evalue=6e-103; PctID=68.25; score=380; {ECO:0000313|EMBL:AEG17561,1}.
       0.511
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.