STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanT2Putative sialic acid transporter 2; May be a sugar-cation symporter involved in sialic acid uptake. Rule:MF_01238}; Multi-pass membrane protein Rule:MF_01238}. transporter (TC 2.A.1.1) family. Sialic acid transporter (TC 2.A.1.12.1) subfamily; sp|Q8FDU9|NANT2_ECOL6;evalue=1e-032; PctID=32.65; score=141; {ECO:0000255|HAMAP-Rule:MF_01238}. (431 aa)    
Predicted Functional Partners:
MCBB_1162
4-oxalocrotonate tautomerase; tr|F6D588|F6D588_METPW;evalue=4e-021; PctID=83.61; score=106; {ECO:0000313|EMBL:AEG18196,1}.
       0.563
yusP5
Putative MFS-type transporter YusP; sp|O32182|YUSP_BACSU;evalue=4e-050; PctID=29.88; score=199.
 
   
 0.471
yyaL
Putative protein YyaL; sp|P37512|YYAL_BACSU;evalue=4e-173; PctID=47.03; score=608.
       0.467
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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