STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_1779Putative 28,5 kDa protein in 7S RNA 5'region; sp|P21336|Y7SR_METFE;evalue=1e-048; PctID=41.73; score=193. (274 aa)    
Predicted Functional Partners:
hpsA
3-hexulose-6-phosphate synthase; Catalyzes the condensation of ribulose 5-phosphate with formaldehyde to form 3-hexulose 6-phosphate. 5-phosphate + formaldehyde; sp|Q46DA4|HPS_METBF;evalue=3e-035; PctID=38.14; score=148.
 
   
 0.641
yxeQ
Putative protein YxeQ; sp|P54956|YXEQ_BACSU;evalue=5e-028; PctID=27.23; score=125.
 
    0.591
MCBB_1878
Lactaldehyde dehydrogenase; Involved in F420 biosynthesis through the oxidation of lactaldehyde to lactate. lactate + NADH; sp|Q6LX65|LADH_METMP;evalue=2e-117; PctID=46.48; score=423.
  
  
 0.572
MCBB_1780
Cytochrome C-type biogenesis protein DsbD; tr|A0A089ZC34|A0A089ZC34_METFO;evalue=5e-034; PctID=41.06; score=150; {ECO:0000313|EMBL:AIS31582,1}.
       0.563
MCBB_1778
Putative protein; tr|O27780|O27780_METTH,tr|T2GK69|T2GK69_9EURY; evalue=4e-009; PctID=47.17; score=66.6; {ECO:0000313|EMBL:AAB86218,1}.
       0.556
MCBB_1782
Putative protein MJ0202; sp|Q57655|Y202_METJA;evalue=2e-061; PctID=41.24; score=236.
       0.532
MCBB_1131
Putative acetyltransferase SH0499; sp|Q4L967|ATRF2_STAHJ;evalue=7e-033; PctID=46.53; score=140.
  
  
 0.498
MCBB_1838
Putative acetyltransferase SACOL2570; sp|Q5HCZ5|ATRF2_STAAC;evalue=2e-009; PctID=37.61; score=62.4.
  
  
 0.498
MCBB_1784
ThiamineS protein; tr|F6D5V8|F6D5V8_METPW;evalue=1e-008; PctID=50.00; score=64.7; {ECO:0000313|EMBL:AEG18911,1}.
       0.483
ctu1
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated urm1 onto the uridine of tRNAs at wobble position. tRNA biosynthesis. subfamily; sp|Q94480|CTU1_DICDI;evalue=3e-047; PctID=34.42; score=189; {ECO:0000255|HAMAP-Rule:MF_03053}.
     
 0.476
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.