STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_1908Region of a membrane-bound protein predicted to be embedded in the membrane; Evalue=; PctID=; score=. (49 aa)    
Predicted Functional Partners:
MCBB_1907
UPF0216 protein; sp|O27030|Y949_METTH;evalue=2e-040; PctID=61.54; score=164; Belongs to the UPF0216 family.
       0.778
MCBB_1905
Putative protein; tr|F6D6U7|F6D6U7_METPW;evalue=3e-025; PctID=45.99; score=120; {ECO:0000313|EMBL:AEG18985,1}.
       0.556
MCBB_1906
Putative protein; tr|F6D6U8|F6D6U8_METPW;evalue=2e-035; PctID=66.97; score=154; {ECO:0000313|EMBL:AEG18986,1}.
       0.556
trkA3
Trk system potassium uptake protein TrkA homolog; Part of a potassium transport system. effectors. This is expected to cause a conformation change that regulates potassium transport (By similarity). Sequence=AAB85754.1; Type=Erroneous initiation; Evidence=; sp|O27333|TRKA_METTH;evalue=1e-075; PctID=63.43; score=282.
       0.408
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.