STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_2248Putative protein; tr|F6D5H9|F6D5H9_METPW;evalue=0.0; PctID=76.59; score=1124; {ECO:0000313|EMBL:AEG19331,1}. (710 aa)    
Predicted Functional Partners:
ykuE3
Putative metallophosphoesterase YkuE; sp|O34870|YKUE_BACSU;evalue=9e-029; PctID=34.91; score=127.
 
     0.547
MCBB_2247
Region of a membrane-bound protein predicted to be embedded in the membrane; Evalue=; PctID=; score=.
       0.465
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.