STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mprAMycobacterial persistence regulator A. (136 aa)    
Predicted Functional Partners:
saeR_2
Staphylococcus exoprotein expression protein R.
 
 
 0.984
mcp4
Methyl-accepting chemotaxis protein 4.
  
 0.978
frzE
Gliding motility regulatory protein.
 
 
 0.978
yegE
Putative diguanylate cyclase YegE.
 
 
 0.968
kinE_1
Sporulation kinase E.
 
 
 0.965
L21_0496
Sensory histidine kinase AtoS.
   
 0.961
arcB_2
Aerobic respiration control sensor protein ArcB.
 
 
 0.941
kinB_2
Alginate biosynthesis sensor protein KinB.
   
 0.935
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.856
arcB_1
Aerobic respiration control sensor protein ArcB.
 
 
 0.854
Your Current Organism:
Methanoculleus chikugoensis
NCBI taxonomy Id: 118126
Other names: DSM 13459, JCM 10825, M. chikugoensis, Methaniculleus sp. MG62, Methanoculleus chikugoensis Dianou et al. 2001, Methanoculleus sp. MG62, NBRC 101202, strain MG62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.