STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L21_0678Magnesium-protoporphyrin O-methyltransferase. (288 aa)    
Predicted Functional Partners:
crtF
Demethylspheroidene O-methyltransferase.
 
     0.851
L21_0679
Hypothetical protein.
 
     0.841
hmuT
Hemin-binding periplasmic protein HmuT precursor.
 
     0.787
L21_0677
Corrinoid ABC transporter substrate-binding protein.
 
     0.509
mhqR
HTH-type transcriptional regulator MhqR.
  
     0.443
L21_0114
FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
  
     0.421
L21_0683
Putative ABC transporter ATP-binding protein.
 
     0.421
L21_0134
FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
  
     0.410
L21_0684
Putative Fe-S oxidoreductase.
 
     0.406
Your Current Organism:
Methanoculleus chikugoensis
NCBI taxonomy Id: 118126
Other names: DSM 13459, JCM 10825, M. chikugoensis, Methaniculleus sp. MG62, Methanoculleus chikugoensis Dianou et al. 2001, Methanoculleus sp. MG62, NBRC 101202, strain MG62
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.