STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntR_1Manganese transport regulator. (150 aa)    
Predicted Functional Partners:
znuB
High-affinity zinc uptake system membrane protein ZnuB.
  
 
 0.781
mntB
Manganese transport system membrane protein MntB.
  
 
 0.781
adcA
Putative zinc transport system zinc-binding lipoprotein AdcA precursor.
  
 
 0.780
L21_1565
Periplasmic solute binding protein family protein.
  
 
 0.780
adcC_1
Putative zinc transport system ATP-binding protein AdcC.
  
 
 0.779
adcC_2
Putative zinc transport system ATP-binding protein AdcC.
  
 
 0.779
L21_0803
Hypothetical protein.
       0.775
hycG_1
Hydrogenase-3 component G.
    
   0.762
hycG_2
Hydrogenase-3 component G.
    
   0.762
thyA1
Thymidylate synthase 1; May catalyze the biosynthesis of dTMP using an unknown cosubstrate; Belongs to the thymidylate synthase family. Archaeal-type ThyA subfamily.
    
 0.677
Your Current Organism:
Methanoculleus chikugoensis
NCBI taxonomy Id: 118126
Other names: DSM 13459, JCM 10825, M. chikugoensis, Methaniculleus sp. MG62, Methanoculleus chikugoensis Dianou et al. 2001, Methanoculleus sp. MG62, NBRC 101202, strain MG62
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