STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsA_3Acetyl-coenzyme A synthetase. (567 aa)    
Predicted Functional Partners:
L21_0833
Putative acetyl-CoA acyltransferase.
  
 
 0.996
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
 
 
 0.987
leuA_1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.985
leuA_2
2-isopropylmalate synthase.
  
 
 0.985
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.983
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
  
 
 0.982
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
  
 
 0.982
acyP
Acylphosphatase.
    
 0.980
cfiB
2-oxoglutarate carboxylase small subunit.
  
 0.955
sucC
Succinyl-CoA ligase [ADP-forming] subunit beta.
  
 
 0.952
Your Current Organism:
Methanoculleus chikugoensis
NCBI taxonomy Id: 118126
Other names: DSM 13459, JCM 10825, M. chikugoensis, Methaniculleus sp. MG62, Methanoculleus chikugoensis Dianou et al. 2001, Methanoculleus sp. MG62, NBRC 101202, strain MG62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.