STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L21_2114Hypothetical protein. (39 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme GlgB.
  
 0.986
malQ_1
4-alpha-glucanotransferase.
  
 
 0.960
malQ_2
4-alpha-glucanotransferase.
  
 
 0.960
L21_2485
Mannosyl oligosaccharide glucosidase.
  
 0.950
pimA_1
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
  
 0.939
algC_2
Phosphomannomutase/phosphoglucomutase.
  
 
 0.935
L21_2119
Glycosyl hydrolase family 57.
  
 
 0.935
gtaB
UTP-glucose-1-phosphate uridylyltransferase.
    
 0.911
argF
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.884
glgE2
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2.
  
 
 0.790
Your Current Organism:
Methanoculleus chikugoensis
NCBI taxonomy Id: 118126
Other names: DSM 13459, JCM 10825, M. chikugoensis, Methaniculleus sp. MG62, Methanoculleus chikugoensis Dianou et al. 2001, Methanoculleus sp. MG62, NBRC 101202, strain MG62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.