STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332195_03386Unannotated protein. (195 aa)    
Predicted Functional Partners:
GCA_000332195_01794
Unannotated protein.
 
 
  0.986
GCA_000332195_06495
Unannotated protein.
 
 
 0.959
GCA_000332195_04980
Unannotated protein.
 
 
  0.935
GCA_000332195_03180
Unannotated protein.
  
 0.890
GCA_000332195_03707
Unannotated protein.
  
  
 0.874
GCA_000332195_01951
Unannotated protein.
 
 0.871
GCA_000332195_02756
Unannotated protein.
    
  0.840
GCA_000332195_05175
Unannotated protein.
    
  0.830
GCA_000332195_06334
Unannotated protein.
    
  0.830
GCA_000332195_01863
Unannotated protein.
 
 
 0.825
Your Current Organism:
Pleurocapsa sp. PCC7319
NCBI taxonomy Id: 118161
Other names: P. sp. PCC 7319, Pleurocapsa sp. ATCC 29388, Pleurocapsa sp. PCC 7319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.