STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332195_03900Unannotated protein. (498 aa)    
Predicted Functional Partners:
GCA_000332195_04738
Unannotated protein.
 
  
 0.737
GCA_000332195_04503
Unannotated protein.
    
  0.713
GCA_000332195_00374
Unannotated protein.
  
  
 0.703
GCA_000332195_00884
Unannotated protein.
  
    0.649
GCA_000332195_00898
Unannotated protein.
  
    0.649
GCA_000332195_03901
Unannotated protein.
 
     0.643
GCA_000332195_01392
Unannotated protein.
  
    0.633
GCA_000332195_03392
Unannotated protein.
  
     0.580
GCA_000332195_03990
Unannotated protein.
  
  
 0.567
GCA_000332195_03296
Unannotated protein.
  
     0.565
Your Current Organism:
Pleurocapsa sp. PCC7319
NCBI taxonomy Id: 118161
Other names: P. sp. PCC 7319, Pleurocapsa sp. ATCC 29388, Pleurocapsa sp. PCC 7319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.