STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309385_01794Unannotated protein. (361 aa)    
Predicted Functional Partners:
GCA_000309385_01793
Unannotated protein.
 
     0.887
GCA_000309385_06114
Unannotated protein.
 
  
  0.695
GCA_000309385_04050
Unannotated protein.
    
 0.676
GCA_000309385_00317
Unannotated protein.
    
  0.652
GCA_000309385_04541
Unannotated protein.
    
  0.642
GCA_000309385_01795
Unannotated protein.
       0.636
GCA_000309385_02021
Unannotated protein.
    
  0.628
GCA_000309385_02818
Unannotated protein.
  
  
  0.582
GCA_000309385_01796
Unannotated protein.
       0.538
GCA_000309385_01797
Unannotated protein.
       0.538
Your Current Organism:
Nodosilinea nodulosa
NCBI taxonomy Id: 118166
Other names: Arhinema longislandicus PCC 7104, Leptolyngbya sp. ATCC 29117, Leptolyngbya sp. PCC 7104, N. nodulosa PCC 7104, Nodosilinea nodulosa PCC 7104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.