STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309385_02188Unannotated protein. (239 aa)    
Predicted Functional Partners:
GCA_000309385_04780
Unannotated protein.
   
    0.681
GCA_000309385_03112
Unannotated protein.
   
   0.674
GCA_000309385_04761
Unannotated protein.
  
   
 0.532
GCA_000309385_02189
Unannotated protein.
       0.519
GCA_000309385_02190
Unannotated protein.
       0.519
GCA_000309385_00894
Unannotated protein.
    
 0.497
GCA_000309385_02187
Unannotated protein.
     
 0.464
GCA_000309385_00498
Unannotated protein.
    
 0.459
GCA_000309385_04997
Unannotated protein.
    
   0.455
Your Current Organism:
Nodosilinea nodulosa
NCBI taxonomy Id: 118166
Other names: Arhinema longislandicus PCC 7104, Leptolyngbya sp. ATCC 29117, Leptolyngbya sp. PCC 7104, N. nodulosa PCC 7104, Nodosilinea nodulosa PCC 7104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.