STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309385_03282Unannotated protein. (440 aa)    
Predicted Functional Partners:
GCA_000309385_03283
Unannotated protein.
 
  
 0.963
GCA_000309385_03284
Unannotated protein.
 
     0.947
GCA_000309385_03285
Unannotated protein.
 
     0.941
GCA_000309385_03682
Unannotated protein.
 
  
 0.813
GCA_000309385_03680
Unannotated protein.
 
    0.793
GCA_000309385_02015
Unannotated protein.
 
  
 0.769
GCA_000309385_03681
Unannotated protein.
 
     0.766
GCA_000309385_03281
Unannotated protein.
       0.714
GCA_000309385_05531
Unannotated protein.
  
     0.529
GCA_000309385_03286
Unannotated protein.
       0.527
Your Current Organism:
Nodosilinea nodulosa
NCBI taxonomy Id: 118166
Other names: Arhinema longislandicus PCC 7104, Leptolyngbya sp. ATCC 29117, Leptolyngbya sp. PCC 7104, N. nodulosa PCC 7104, Nodosilinea nodulosa PCC 7104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.