STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309385_03506Unannotated protein. (188 aa)    
Predicted Functional Partners:
GCA_000309385_02224
Unannotated protein.
  
   
 0.794
GCA_000309385_01522
Unannotated protein.
  
     0.762
GCA_000309385_02627
Unannotated protein.
  
     0.761
GCA_000309385_02079
Unannotated protein.
  
     0.758
GCA_000309385_01736
Unannotated protein.
  
     0.751
GCA_000309385_02579
Unannotated protein.
  
     0.744
GCA_000309385_01437
Unannotated protein.
  
     0.743
GCA_000309385_02693
Unannotated protein.
  
     0.697
GCA_000309385_05961
Unannotated protein.
  
     0.694
GCA_000309385_00812
Unannotated protein.
  
     0.659
Your Current Organism:
Nodosilinea nodulosa
NCBI taxonomy Id: 118166
Other names: Arhinema longislandicus PCC 7104, Leptolyngbya sp. ATCC 29117, Leptolyngbya sp. PCC 7104, N. nodulosa PCC 7104, Nodosilinea nodulosa PCC 7104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.