STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309385_04972Unannotated protein. (182 aa)    
Predicted Functional Partners:
GCA_000309385_01183
Unannotated protein.
  
 
   0.968
GCA_000309385_03947
Unannotated protein.
  
 
   0.959
GCA_000309385_05534
Unannotated protein.
  
 
   0.946
GCA_000309385_05044
Unannotated protein.
  
 
   0.920
GCA_000309385_01897
Unannotated protein.
  
 
   0.911
GCA_000309385_00559
Unannotated protein.
  
 
   0.909
GCA_000309385_04798
Unannotated protein.
    
   0.888
GCA_000309385_03740
Unannotated protein.
  
 
   0.875
GCA_000309385_03176
Unannotated protein.
  
 
   0.834
GCA_000309385_02060
Unannotated protein.
  
 
   0.831
Your Current Organism:
Nodosilinea nodulosa
NCBI taxonomy Id: 118166
Other names: Arhinema longislandicus PCC 7104, Leptolyngbya sp. ATCC 29117, Leptolyngbya sp. PCC 7104, N. nodulosa PCC 7104, Nodosilinea nodulosa PCC 7104
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.