STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309385_06158Unannotated protein. (431 aa)    
Predicted Functional Partners:
GCA_000309385_06157
Unannotated protein.
   
 
 0.972
GCA_000309385_06161
Unannotated protein.
 
 
 
 0.963
GCA_000309385_06160
Unannotated protein.
   
 
 0.957
GCA_000309385_00559
Unannotated protein.
  
 
   0.952
GCA_000309385_00857
Unannotated protein.
    
 
 0.924
GCA_000309385_04620
Unannotated protein.
    
 
 0.924
GCA_000309385_00411
Unannotated protein.
   
 
 0.908
GCA_000309385_05044
Unannotated protein.
  
 
 
 0.905
GCA_000309385_03303
Unannotated protein.
   
 
 0.903
GCA_000309385_05534
Unannotated protein.
  
 
 
 0.897
Your Current Organism:
Nodosilinea nodulosa
NCBI taxonomy Id: 118166
Other names: Arhinema longislandicus PCC 7104, Leptolyngbya sp. ATCC 29117, Leptolyngbya sp. PCC 7104, N. nodulosa PCC 7104, Nodosilinea nodulosa PCC 7104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.