STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX75459.1[NU] COG3166 Tfp pilus assembly protein PilN. (289 aa)    
Predicted Functional Partners:
EDX75399.1
[NU] COG4972 Tfp pilus assembly protein, ATPase PilM.
  
 0.998
EDX75477.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.997
EDX75397.1
Bacterial type II and III secretion system protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.988
EDX73687.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
   
 
 0.851
EDX78491.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
   
 
 0.850
EDX71297.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.838
EDX74423.1
GSPII_E N-terminal domain family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.838
EDX74497.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.838
EDX73775.1
GSPII_E N-terminal domain family; [S] COG1376 Uncharacterized protein conserved in bacteria.
   
 
 0.838
EDX71939.1
[S] COG1652 Uncharacterized protein containing LysM domain.
    
   0.796
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.