STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX75489.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (157 aa)    
Predicted Functional Partners:
EDX72582.1
Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
   
 0.986
EDX76772.1
Hsp90 protein, putative; Molecular chaperone. Has ATPase activity.
    
 0.984
EDX71773.1
[RTKL] COG0515 Serine/threonine protein kinase; protein kinase domain, putative.
   
 0.948
EDX76209.1
Protein kinase domain; [RTKL] COG0515 Serine/threonine protein kinase.
   
 0.948
EDX78237.1
[R] COG0666 FOG: Ankyrin repeat.
    
 0.947
EDX71741.1
[TZDR] COG5126 Ca2+-binding protein (EF-Hand superfamily).
    
 0.922
EDX70914.1
EF hand domain protein.
    
 0.921
EDX76986.1
Dual specificity phosphatase, catalytic domain protein.
    
 0.913
EDX74249.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 0.905
MC7420_41
[M] COG0859 ADP-heptose:LPS heptosyltransferase.
   
 0.886
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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