STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX70784.1[U] COG3210 Large exoproteins involved in heme utilization or adhesion. (147 aa)    
Predicted Functional Partners:
EDX71269.1
Cellulase (glycosyl hydrolase family 5), putative; [G] COG2730 Endoglucanase.
  
 0.665
guaA
GMP synthase, C-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.593
EDX70779.1
Hypothetical protein.
       0.546
EDX74505.1
Competence/damage-inducible protein CinA N-terminal domain, putative; [R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
  0.516
EDX73334.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
  0.500
EDX71395.1
GDSL-like lipase/acylhydrolase domain protein; [E] COG2755 Lysophospholipase L1 and related esterases.
   
  0.500
EDX77135.1
GDSL-like lipase/acylhydrolase domain protein; [E] COG2755 Lysophospholipase L1 and related esterases.
   
  0.500
EDX77868.1
GDSL-like lipase/acylhydrolase domain protein; [E] COG2755 Lysophospholipase L1 and related esterases.
   
  0.500
EDX72833.1
GDSL-like lipase/acylhydrolase domain protein; [E] COG2755 Lysophospholipase L1 and related esterases.
   
  0.500
EDX74191.1
GDSL-like lipase/acylhydrolase domain protein; [E] COG2755 Lysophospholipase L1 and related esterases.
   
  0.500
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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