STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX70866.1[I] COG3000 Sterol desaturase. (244 aa)    
Predicted Functional Partners:
EDX73843.1
Squalene and phytoene synthases superfamily; [I] COG1562 Phytoene/squalene synthetase.
  
 0.921
EDX74085.1
Hypothetical protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD binding domain, putative.
   
 0.785
EDX70941.1
Hypothetical protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD binding domain, putative.
   
 0.785
EDX72963.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
   
 0.665
EDX77587.1
Methyltransferase domain family.
   
 0.665
EDX74587.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
   
 0.665
EDX74980.1
[Q] COG2124 Cytochrome P450.
  
 0.641
EDX72135.1
[Q] COG2124 Cytochrome P450.
  
 0.628
EDX74399.1
[Q] COG2124 Cytochrome P450.
  
 0.627
mgsA
Methylglyoxal synthase, putative; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
   
 0.608
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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