STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71366.1[V] COG1680 Beta-lactamase class C and other penicillin binding proteins. (422 aa)    
Predicted Functional Partners:
guaA
GMP synthase, C-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.820
EDX74998.1
[R] COG0517 FOG: CBS domain.
    
  0.692
EDX77289.1
Condensation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.617
EDX76299.1
Hypothetical protein; [F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
    
  0.584
EDX76459.1
SCP-like extracellular protein, putative; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
   
  0.567
EDX72582.1
Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
  
 0.566
MC7420_14
Beta-lactamase, putative; [V] COG2367 Beta-lactamase class A.
    
 0.500
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.500
EDX73693.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
 0.500
EDX72246.1
Hypothetical protein.
     
 0.494
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.