STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71395.1GDSL-like lipase/acylhydrolase domain protein; [E] COG2755 Lysophospholipase L1 and related esterases. (279 aa)    
Predicted Functional Partners:
EDX71269.1
Cellulase (glycosyl hydrolase family 5), putative; [G] COG2730 Endoglucanase.
  
 0.883
EDX71299.1
Glycosyl hydrolase family 9; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 0.750
EDX77184.1
Tetratricopeptide repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.633
EDX71280.1
Glycosyl hydrolase family 9; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 0.615
EDX75702.1
Glycosyl hydrolase family 9; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
 0.615
EDX73869.1
Conserved domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.583
EDX71372.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.556
EDX74043.1
Conserved domain protein; [R] COG5006 Predicted permease, DMT superfamily.
  
     0.549
EDX73877.1
S-layer domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.512
EDX74490.1
Hypothetical protein; [R] COG0457 FOG: TPR repeat.
  
     0.511
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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