STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX76764.1Hypothetical protein; [R] COG4637 Predicted ATPase. (114 aa)    
Predicted Functional Partners:
EDX77002.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.773
EDX77882.1
Hypothetical protein; [R] COG4637 Predicted ATPase.
  
     0.768
EDX75053.1
RecF/RecN/SMC N terminal domain, putative; [R] COG4637 Predicted ATPase.
  
     0.765
EDX74659.1
RecF/RecN/SMC N terminal domain, putative; [R] COG4637 Predicted ATPase.
  
     0.719
EDX76512.1
Hypothetical protein; [R] COG4637 Predicted ATPase.
  
     0.700
EDX78044.1
RecF/RecN/SMC N terminal domain, putative; [R] COG4637 Predicted ATPase.
  
     0.699
EDX70850.1
Hypothetical protein.
  
     0.588
EDX76824.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
       0.558
EDX78184.1
Hypothetical protein; [R] COG4637 Predicted ATPase.
  
     0.545
EDX73027.1
Type III restriction enzyme, res subunit family; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
 
     0.456
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.