STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX75198.1Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases. (333 aa)    
Predicted Functional Partners:
EDX77542.1
Nucleotidyl transferase family; [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 0.840
EDX75054.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
 
 
  0.822
EDX75202.1
Methyltransferase, FkbM family protein; [QR] COG0500 SAM-dependent methyltransferases.
  
  
 0.791
EDX75167.1
Hypothetical protein; [M] COG0438 Glycosyltransferase.
       0.773
EDX75209.1
Methyltransferase, FkbM family protein; [QR] COG0500 SAM-dependent methyltransferases.
       0.752
EDX72832.1
Nucleotidyl transferase superfamily; [M] COG1210 UDP-glucose pyrophosphorylase.
    
 0.738
EDX72400.1
Polysaccharide biosynthesis protein; [MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.703
EDX72513.1
Polysaccharide biosynthesis protein; [MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.703
EDX76229.1
Bacterial sugar transferase domain protein; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.688
EDX76380.1
[G] COG0380 Trehalose-6-phosphate synthase.
     
 0.666
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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