STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71762.1[S] COG2361 Uncharacterized conserved protein. (92 aa)    
Predicted Functional Partners:
EDX71671.1
Hypothetical protein; [R] COG1669 Predicted nucleotidyltransferases; Nucleotidyltransferase domain, putative.
 
    0.950
EDX71356.1
[S] COG2361 Uncharacterized conserved protein.
  
  
  0.849
EDX70772.1
[S] COG2361 Uncharacterized conserved protein.
  
  
  0.848
EDX73748.1
Hypothetical protein; [R] COG1669 Predicted nucleotidyltransferases; Nucleotidyltransferase domain, putative.
 
    0.792
EDX73819.1
Hypothetical protein; [R] COG1669 Predicted nucleotidyltransferases; Nucleotidyltransferase domain, putative.
 
    0.780
EDX77677.1
Hypothetical protein; [R] COG1669 Predicted nucleotidyltransferases; Nucleotidyltransferase domain, putative.
  
    0.759
EDX71361.1
Hypothetical protein; [R] COG1669 Predicted nucleotidyltransferases; Nucleotidyltransferase domain, putative.
 
    0.568
EDX71410.1
Hypothetical protein; [R] COG1669 Predicted nucleotidyltransferases; Nucleotidyltransferase domain, putative.
 
    0.566
EDX71678.1
Hypothetical protein.
       0.533
EDX72895.1
[S] COG2361 Uncharacterized conserved protein.
  
  
 
0.494
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.