STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71203.1[E] COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (319 aa)    
Predicted Functional Partners:
EDX77503.1
Serine O-acetyltransferase, putative; [E] COG1045 Serine acetyltransferase.
 
 0.969
EDX73795.1
Serine O-acetyltransferase, putative; [E] COG1045 Serine acetyltransferase.
 
 0.969
EDX71931.1
Bacterial transferase hexapeptide repeat protein; [E] COG1045 Serine acetyltransferase; overlaps another CDS with the same product name.
 
 0.961
EDX71905.1
Bacterial transferase hexapeptide repeat protein; [E] COG1045 Serine acetyltransferase; overlaps another CDS with the same product name.
 
 0.952
cysS
[J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.936
EDX72491.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.854
EDX73304.1
[P] COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.737
EDX71161.1
Nitrite and sulphite reductase 4Fe-4S domain protein; [P] COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.718
EDX72615.1
Ornithine cyclodeaminase/mu-crystallin family; [E] COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog.
 
 
 0.711
EDX71774.1
Cyanophycin synthetase; [M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes.
    
 0.691
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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