STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71213.1[S] COG2307 Uncharacterized protein conserved in bacteria. (315 aa)    
Predicted Functional Partners:
EDX71186.1
[S] COG2308 Uncharacterized conserved protein.
  
 0.993
EDX71225.1
Bacterial transglutaminase-like domain family protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
  
 0.927
EDX75687.1
Peptidase, T1 family; [O] COG3484 Predicted proteasome-type protease.
 
    0.840
EDX77495.1
Bacterial transglutaminase-like domain family protein; [S] COG4196 Uncharacterized protein conserved in bacteria.
 
  
 0.821
EDX75824.1
Transglutaminase-like superfamily protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
  
 0.821
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.