STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72879.1[O] COG0450 Peroxiredoxin. (212 aa)    
Predicted Functional Partners:
EDX76156.1
Thioredoxin-disulfide reductase, putative; [O] COG0492 Thioredoxin reductase.
  
 
 0.987
EDX70623.1
ParB-like nuclease domain family; [K] COG1475 Predicted transcriptional regulators.
   
 0.980
EDX71059.1
Redoxin family; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.965
EDX70893.1
Thioredoxin domain protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.965
EDX76528.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 0.963
EDX73022.1
Redoxin superfamily; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.961
EDX75621.1
Thioredoxin, putative; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.935
EDX74350.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.891
EDX73000.1
Pyridine nucleotide-disulphide oxidoreductase, putative; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 
 0.883
EDX71339.1
Pyridine nucleotide-disulphide oxidoreductase, putative; [O] COG0492 Thioredoxin reductase.
  
 
 0.883
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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