STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72443.1Amidohydrolase family; [R] COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold. (365 aa)    
Predicted Functional Partners:
EDX72409.1
YcaO-like family protein; [S] COG1944 Uncharacterized conserved protein.
 
     0.900
EDX72582.1
Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
  
 
 0.585
EDX71696.1
Alcohol dehydrogenase GroES-like domain family; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 
  0.583
EDX75213.1
Transporter gate domain protein; [R] COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis.
   
    0.508
EDX78702.1
Acyl-CoA dehydrogenase, middle domain protein; [I] COG1960 Acyl-CoA dehydrogenases.
 
  
 0.496
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.493
EDX77289.1
Condensation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.483
EDX73254.1
Hypothetical protein; [T] COG4252 Predicted transmembrane sensor domain; CHASE2 domain family.
  
     0.478
EDX72655.1
Hypothetical protein; [Q] COG2124 Cytochrome P450.
  
     0.473
EDX72449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [R] COG3899 Predicted ATPase.
 
     0.472
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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