STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72451.1[R] COG4249 Uncharacterized protein containing caspase domain. (335 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.786
EDX75767.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.776
EDX74712.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
 
    0.730
EDX72463.1
PBS lyase HEAT-like repeat domain protein; [T] COG5635 Predicted NTPase (NACHT family).
     0.704
EDX76461.1
Hypothetical protein; [T] COG4252 Predicted transmembrane sensor domain; CHASE2 domain family.
  
 
   0.620
EDX78119.1
Tetratricopeptide repeat family; [R] COG0457 FOG: TPR repeat.
 
     0.569
EDX72441.1
Tetratricopeptide repeat family; [R] COG0457 FOG: TPR repeat.
   
   0.561
EDX78158.1
Tetratricopeptide repeat domain protein; [R] COG1672 Predicted ATPase (AAA+ superfamily).
  
  
  0.541
EDX74568.1
PBS lyase HEAT-like repeat domain protein; [C] COG1413 FOG: HEAT repeat.
  
  0.533
EDX77997.1
PBS lyase HEAT-like repeat domain protein; [C] COG1413 FOG: HEAT repeat.
  
     0.526
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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