STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72495.1[S] COG1262 Uncharacterized conserved protein. (471 aa)    
Predicted Functional Partners:
EDX72490.1
Hypothetical protein; [S] COG4301 Uncharacterized conserved protein.
 
 
 0.906
EDX75743.1
Hypothetical protein; [S] COG4301 Uncharacterized conserved protein.
 
 
0.661
EDX72522.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
       0.545
MC7420_98
Hypothetical protein; [R] COG0121 Predicted glutamine amidotransferase.
 
 
  0.486
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase family; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.460
EDX72500.1
Hypothetical protein.
       0.454
EDX78645.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.404
EDX72519.1
Oxidoreductase, aldo/keto reductase family; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
       0.401
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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