STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73443.1Orange carotenoid protein, N-terminal domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the orange carotenoid-binding protein family. (282 aa)    
Predicted Functional Partners:
EDX75277.1
Hypothetical protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.891
EDX75155.1
Phycobilisome protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 
 0.885
EDX75131.1
Phycobilisome Linker polypeptide, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the phycobilisome linker protein family.
  
 
 
 0.884
EDX74958.1
Phycobilisome protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 
 0.878
EDX78331.1
Allophycocyanin, beta subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 
 0.868
EDX75158.1
Allophycocyanin, beta subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 
 0.867
EDX72815.1
Phycobilisome Linker polypeptide domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the phycobilisome linker protein family.
  
 
   0.855
EDX73461.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.769
EDX72055.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.712
EDX71231.1
[S] COG3431 Predicted membrane protein.
  
     0.699
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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